Since such singularities point out an underlying resonance, it may be useful to increase the regularisation parameter (freq_eps), or to shift the bounds of the frequency interval, omega_min, omega_max, or to reduce the number of frequency points.
The question of numerical instability is in part a question of computer word length. Considering that the fit procedure with
Ry typically extracts resonances to an accuracy of
Ry, way beyond the inherent accuracy attainable with any flavour of DFT, FAST is written in single precision arithmetic, because that saves a factor of about two on the execution time.